The detailed information of tRNA gene sequence


Sequence ID>W2010102710
Genome IDBJXC01000020
Search identical group
Phylum/ClassBacteroidota
SpeciesEmpedobacter brevis NBRC 14943 = ATCC 43319 [BJXC]
Start position on genome 79974
End posion on genome 80046
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaaataaagt
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACACTAGATTTTCATTCTAGAAAGAGGGGTTCGATTC
CCCTAGGGACTACaa
Downstream region at tRNA end position 
annnnnnnnn
Secondary structure (Cloverleaf model)
>W2010102710	Glu	TTC
                   t      ACaa annnnnnnnn
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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