The detailed information of tRNA gene sequence


Sequence ID>W2010102722
Genome IDBJXC01000035
Search identical group
Phylum/ClassBacteroidota
SpeciesEmpedobacter brevis NBRC 14943 = ATCC 43319 [BJXC]
Start position on genome 37683
End posion on genome 37612
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttattct
tRNA gene sequence 
ACGGGCATAGTTCAATGGTAGAATAGCGGTCTCCAAAACCGTTGATCAGGGTTCGAATCC
TTGTGCCCGTGCta
Downstream region at tRNA end position 
aatgaaaacg
Secondary structure (Cloverleaf model)
>W2010102722	Trp	CCA
                   t      GCta aatgaaaacg
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G T T C C     A
        A A        A      | | + | |     G
      T     C T T G       C A G G G     C
      G     | | | +                 T T
      G     G A A T
        T A        A     TGAT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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