The detailed information of tRNA gene sequence


Sequence ID>SRA1031677
Genome IDSRR035087.469841
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 483
End posion on genome 397
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
GGAAGATTGGATGAGTGGCTTAATCAGCAGTTTGCTAAACTGTCAAACTTCAAATAGTTT
CGTGGGTTCGAATCCCGCATCTTCCGCat
Downstream region at tRNA end position 
tgaagtcctt
Secondary structure (Cloverleaf model)
>SRA1031677	Ser	GCT
                   t      GCat tgaagtcctt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T G A        G      | + | | |     G
    G       G T A G       G T G G G     C
    G         | | |                 T T
    C       A A T C
      T T          A     CAAACTTCAAATAGTTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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