The detailed information of tRNA gene sequence


Sequence ID>SRA1032165
Genome IDSRR035087.567130
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 400
End posion on genome 305
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caagtaatta
tRNA gene sequence 
GGAAAGGTGGCCGAGTCTGGCTGAAGGCGGTTGGTTGCTAACCAATTATGGGGGTTCTAC
CTCCATCGCTAGGTTCGAATCCTGCCCTTTCCGCCA
Downstream region at tRNA end position 
tttgggtcgt
Secondary structure (Cloverleaf model)
>SRA1032165	Ser	GCT
                   a      GCCA tttgggtcgt
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
    C T G A        G        + | | |     G
  T         G C C G       C T A G G     C
  G           | | |                 T T
  G         A G G C
    C T G A        G     TATGGGGGTTCTACCTCCATCG
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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