The detailed information of tRNA gene sequence


Sequence ID>SRA1032228
Genome IDSRR035087.581792
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 245
End posion on genome 172
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCGACGTTCGCAATGTCGAGGTCAGGGGTTCGAGA
CCCCTCGGCTCCACtc
Downstream region at tRNA end position 
caccccggga
Secondary structure (Cloverleaf model)
>SRA1032228	Ala	CGC
                   t      ACtc caccccggga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          A G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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