The detailed information of tRNA gene sequence


Sequence ID>W2010169567
Genome IDCABFWF010000008
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium endolithicum JC140 [CABFWF]
Start position on genome 487
End posion on genome 398
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccctttcaa
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAACGCGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
tcctctagat
Secondary structure (Cloverleaf model)
>W2010169567	Ser	GGA
                   a      GCCA tcctctagat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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