The detailed information of tRNA gene sequence


Sequence ID>SRA1032324
Genome IDSRR035087.605215
Search identical group
Phylum/Class454 Sequencing (SRP001808)
Species
Start position on genome 171
End posion on genome 246
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcattgtgt
tRNA gene sequence 
AGGGCTGTAGCTTAATTGGCAAAGCGGCGGTCTCCAAAACCGAAGAGTGCGGGTTCAATT
CCTGCCAGCCCTGCCA
Downstream region at tRNA end position 
ttattttctg
Secondary structure (Cloverleaf model)
>SRA1032324	Trp	CCA
                   t      GCCA ttattttctg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       T T C G       G C G G G     C
    G       | | | |                 T T
    G       A A G C
      C A          G     AGAGT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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