The detailed information of tRNA gene sequence


Sequence ID>SRA1032570
Genome IDSRR035088.50360
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 221
End posion on genome 132
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tactgcaata
tRNA gene sequence 
GGAGAGGTCGCGTAGCCTGGCTTAGCGCGCACGCTTGGAAAGCGTGTAATTCGAAAGGGT
TCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtcaattttt
Secondary structure (Cloverleaf model)
>SRA1032570	Ser	GGA
                   a      GCCA gtcaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        C      | | | | |     A
  T         T G C G       G A G G G     C
  G         + | | |                 T T
  G         G C G C
    C T T A        G     TAATTCGAAAGGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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