The detailed information of tRNA gene sequence


Sequence ID>SRA1032575
Genome IDSRR035088.51434
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 286
End posion on genome 195
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatagagtgc
tRNA gene sequence 
GGAGGGATGGCAGAGTCCGGTTGAATGCGCATGACTCGAAATCATGTGTGCTCGCAAGAG
CACCGGGGGTTCGAATCCCTCTCCCTCCGCCG
Downstream region at tRNA end position 
ggctttgcgc
Secondary structure (Cloverleaf model)
>SRA1032575	Ser	CGA
                   c      GCCG ggctttgcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G A C G       G G G G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        G     TGTGCTCGCAAGAGCACC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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