The detailed information of tRNA gene sequence


Sequence ID>W2010255708
Genome IDCABJBP020000035
Search identical group
Phylum/ClassActinomycetota
SpeciesCollinsella aerofaciens [CABJBP]
Start position on genome 4469
End posion on genome 4392
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acgcctgcct
tRNA gene sequence 
GGGGAGTTAGCTCAGTTTGGTTAGAGCGCCGGCCTGTCACGTCGGAGGTCGCGGGTTCGA
GCCCCGTACTTCCCGCCA
Downstream region at tRNA end position 
acgcaattaa
Secondary structure (Cloverleaf model)
>W2010255708	Asp	GTC
                   t      GCCA acgcaattaa
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C
                     T - A          C G
                    T     T G C C C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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