The detailed information of tRNA gene sequence


Sequence ID>SRA1033280
Genome IDSRR035088.212861
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 106
End posion on genome 16
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccaaaattt
tRNA gene sequence 
GGAGAGGTGGGAGAGTGGCTTAATCCACCAGTTTGCTAAACTGACGTACCAATTACGGGT
ACCGGGGGTTCGAATCCCCCCCCCTCCGCAA
Downstream region at tRNA end position 
aaggaaacct
Secondary structure (Cloverleaf model)
>SRA1033280	Ser	GCT
                   t      GCAA aaggaaacct
                     G - C
                     G - C
                     A - T
                     G - C
                     A   C
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A G G       G G G G G     C
    G         | | |                 T T
    C       A T C C
      T T A        A     CGTACCAATTACGGGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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