The detailed information of tRNA gene sequence


Sequence ID>SRA1033307
Genome IDSRR035088.221490
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 187
End posion on genome 94
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgtcttttt
tRNA gene sequence 
GGAGAGGTGACCGAGTTGGCTTAAGGTGCGCGCCTGCTAAGCGTAGTGTAGGAGTAACAT
CTTACCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tttatagaaa
Secondary structure (Cloverleaf model)
>SRA1033307	Ser	GCT
                   t      GCCA tttatagaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    T T G A        G      | | | | |     G
  G         G C C A       C A G G G     C
  G           | | |                 T T
  C         A G G T
    T T A          G     GTGTAGGAGTAACATCTTACC
                    C   A
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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