The detailed information of tRNA gene sequence


Sequence ID>SRA1033309
Genome IDSRR035088.221623
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 232
End posion on genome 143
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaaaaacat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTTAAGGCGGCGGTCTTGAAAACCGTTGTAGATTAACGTCTA
CCTAGGGTTCGAATCCCTATCTCTCCGCTA
Downstream region at tRNA end position 
aaaaatccgt
Secondary structure (Cloverleaf model)
>SRA1033309	Ser	TGA
                   t      GCTA aaaaatccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       T A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTAGATTAACGTCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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