The detailed information of tRNA gene sequence


Sequence ID>SRA1033402
Genome IDSRR035088.246061
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 148
End posion on genome 218
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtataattaa
tRNA gene sequence 
GGGTGCGTCGTATACTGGTAGTATATCTGCCTCCAGAGCAGAGGAAGGGGGTTCGATTCC
CTCCGTGCCCAtcg
Downstream region at tRNA end position 
ggatctcacc
Secondary structure (Cloverleaf model)
>SRA1033402	Trp	CCA
                   a      Atcg ggatctcacc
                     G - C
                     G - C
                     G - C
                     T + G
                     G + T
                     C - G
                     G - C          T T
                    T     C T C C C     A
        C A        C      | + | | |     G
      T     T A T G       G G G G G     C
      G     + | | +                 T T
      G     G T A T
        T A        A     GGAA
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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