The detailed information of tRNA gene sequence


Sequence ID>SRA1033502
Genome IDSRR035088.274810
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 235
End posion on genome 330
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaggcattcc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCGTAACGGGGTCGACTCGAAATCGATTTGTCCCGTGAATAG
CGGGGCACGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gatttgctaa
Secondary structure (Cloverleaf model)
>SRA1033502	Ser	CGA
                   c      GCCA gatttgctaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    G T A          G     TTGTCCCGTGAATAGCGGGGCAC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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