The detailed information of tRNA gene sequence


Sequence ID>SRA1033662
Genome IDSRR035088.317387
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 128
End posion on genome 39
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgtcgtaaaa
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGCTGAGTGCGCACGCTTGGAAAGCGTGTATACAGCAATGTA
TCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tacgcttttc
Secondary structure (Cloverleaf model)
>SRA1033662	Ser	GGA
                   a      GCCA tacgcttttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C T G A        C      | | | | |     G
  C         T A C G       C A G G G     C
  G         + | | |                 T T
  G         G T G C
    C T G A        G     TATACAGCAATGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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