The detailed information of tRNA gene sequence


Sequence ID>SRA1033728
Genome IDSRR035088.338024
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 183
End posion on genome 108
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaaaaaataa
tRNA gene sequence 
CGGGGTATAGCGTAGTCCGGTCAGCGCGCCTGCTTTGGGAGCAGGAGGTCGCAGGTTCAA
ATCCTGCTACCCCGACat
Downstream region at tRNA end position 
ttaaaagggt
Secondary structure (Cloverleaf model)
>SRA1033728	Pro	TGG
                   a      ACat ttaaaagggt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
    C T G A        A      | | | | |     A
  C         T G C G       G C A G G     C
  G         + | | |                 T T
  G         G C G C
    T C A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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