The detailed information of tRNA gene sequence


Sequence ID>SRA1033871
Genome IDSRR035088.386039
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 290
End posion on genome 195
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
attacgttgt
tRNA gene sequence 
GGAAGTGGGGTTGTGTCTGGTGACACTCCTGGACTTCAAATCCAGTGGGAGGTGTTAATA
GCGTCTCTGGTGGGGTTCGATTCCCCATGCACTTCCgc
Downstream region at tRNA end position 
cactttcgaa
Secondary structure (Cloverleaf model)
>SRA1033871	SeC	TCA
                   t      CCgc cactttcgaa
                     G + T
                     G + T
                     A   C
                     A   A
                     G - C
                     T + G
                     G + T          T T
                    G     A C C C C     A
    C T G T        G      | | | | |     G
  T         G T T G       T G G G G     C
  G         | |   +                 T T
  G         C A C T
    T G A          C     TGGGAGGTGTTAATAGCGTCTCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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