The detailed information of tRNA gene sequence


Sequence ID>SRA1033879
Genome IDSRR035088.390582
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 28
End posion on genome 104
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tggttgtttt
tRNA gene sequence 
AGGAGTGTAGCTCAGTCTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTCAGGGGTTCGAA
TCCTCTCACTCCTGCCA
Downstream region at tRNA end position 
gcgccgagat
Secondary structure (Cloverleaf model)
>SRA1033879	Trp	CCA
                   t      GCCA gcgccgagat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      T G A        A      | | + | |     G
    C       C T C G       A G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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