The detailed information of tRNA gene sequence


Sequence ID>SRA1033944
Genome IDSRR035088.417800
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 224
End posion on genome 147
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atagcaaaaa
tRNA gene sequence 
GGGCCCGTAGTTCAGTTGGCCAGAACGTCTGACTGGCAGTCAGAAGATTCAGGGGTTCAA
GTCCCCTCGGGTCCACTA
Downstream region at tRNA end position 
tatagggggg
Secondary structure (Cloverleaf model)
>SRA1033944	Ala	GGC
                   a      ACTA tatagggggg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T T G       A G G G G     C
    G       | | | |                 T T
    G       G A A C
      C C A        G     AGATTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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