The detailed information of tRNA gene sequence


Sequence ID>SRA1033961
Genome IDSRR035088.424143
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 220
End posion on genome 307
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atagtataaa
tRNA gene sequence 
GGAGGAGTCGGATAGCGGTTTTATTCCACTCGCTTGGAAAGCGGGCGAGCGCAAGCTCAC
GTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
cgacaattta
Secondary structure (Cloverleaf model)
>SRA1033961	Ser	GGA
                   a      GCCA cgacaattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    G C G A        C      | | | | |     G
  G         T A G G       G T G G G     C
  T           | | |                 T T
  T         T T C C
    T T A          A     CGAGCGCAAGCTCAC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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