The detailed information of tRNA gene sequence


Sequence ID>W2010339216
Genome IDCACZYS010000102
Search identical group
Phylum/ClassBacillota
SpeciesSharpea azabuensis [CACZYS]
Start position on genome 387
End posion on genome 294
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caacgaacct
tRNA gene sequence 
AGGGGCTTGGTTCAATGGTAGAGCATCGGTCTCCATGGTAGAGCATCGGTCTCCAAAACC
GTTGATGCGGGTTCGATTCCTGCAGCCCCTGCCA
Downstream region at tRNA end position 
gttgattatg
Secondary structure (Cloverleaf model)
>W2010339216	Trp	CCA
                   t      GCCA gttgattatg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A          T T
                    T     C G T C C     A
        A A        G      | | + | |     G
      T     C T T G       G C G G G     C
      G     | | + |                 T T
      G     G A G C
        T A        A     GCATCGGTCTCCAAAACCGTTGAT
                    T - A
                    C - G
                    G   A
                    G + T
                    T + G
                  C       G
                  T       T
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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