The detailed information of tRNA gene sequence


Sequence ID>SRA1034067
Genome IDSRR035088.473148
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 133
End posion on genome 228
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttataggt
tRNA gene sequence 
ATAGAGTGGATGGGACTGGTGTCTCACCTGGTCTTCAAAACCAGTAGCAGACGGATAAAA
CCGGCTGTGGCAGGTTCGATTCCTGCCCCTCTCTGCta
Downstream region at tRNA end position 
agaaaaatta
Secondary structure (Cloverleaf model)
>SRA1034067	SeC	TCA
                   t      GCta agaaaaatta
                     A - T
                     T   C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C
                     G - C          T T
                    G     C G T C C     A
      T C A        A      | | | | |     G
    G       G G G T       G C A G G     C
    G       | + | |                 T T
    T       C T C A
      G T          C     TAGCAGACGGATAAAACCGGCTGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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