The detailed information of tRNA gene sequence


Sequence ID>SRA1034083
Genome IDSRR035088.480444
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 338
End posion on genome 249
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctttgaattt
tRNA gene sequence 
GGNGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTACGCCATAAGTGT
ACCGGGGTTCGAATCCCTTCCTCTCCGCAA
Downstream region at tRNA end position 
aaaattaaat
Secondary structure (Cloverleaf model)
>SRA1034083	Ser	GGA
                   t      GCAA aaaattaaat
                     G - C
                     G - C
                     N   T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G        + | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGCCATAAGTGTAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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