The detailed information of tRNA gene sequence


Sequence ID>SRA1034142
Genome IDSRR035088.507886
Search identical group
Phylum/Class454 Sequencing (SRP001809)
Species
Start position on genome 428
End posion on genome 335
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gacctgcttg
tRNA gene sequence 
CGGAGAGGTGTCCGAGTGGCTTAAGGAGCACGCTTGGAAAGCGTGTGAATGGGTAGTCCC
TGGTTCCGTGGGTTCGAATCCCACCTCTCCGCCAa
Downstream region at tRNA end position 
tcttgcttta
Secondary structure (Cloverleaf model)
>SRA1034142	Ser	GGA
                   g      CCAa tcttgcttta
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    G     C A C C C     A
    T G A G        T      | | | | |     G
  G         C C T G       G T G G G     C
  G           | +                   T T
  C         A G G A
    T T A          G     TGAATGGGTAGTCCCTGGTTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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