The detailed information of tRNA gene sequence


Sequence ID>SRA1034173
Genome IDSRR035089.12110
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 255
End posion on genome 344
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaacccatcc
tRNA gene sequence 
CGGAGGGGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCGTGCAAGCGC
ACCGTGGGTTCGAATCCCACCCCTCCGCCAt
Downstream region at tRNA end position 
ttcagtcctt
Secondary structure (Cloverleaf model)
>SRA1034173	Ser	TGA
                   c      CCAt ttcagtcctt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    G     C A C C C     A
    C G A G        T      | | | | |     G
  G         C C G G       G T G G G     C
  G           |   |                 T T
  T         A G G C
    T T A          A     CGTGCGTGCAAGCGCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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