The detailed information of tRNA gene sequence


Sequence ID>W2010362684
Genome IDCADDYR010000222
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium [CADDYR]
Start position on genome 2309
End posion on genome 2407
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aacattgatc
tRNA gene sequence 
GGGGGTGGAAGGGCCCCGGTGGGTTCCGCGGTCTTCAAAACCGTTGGGGGGCCAGACCAG
CTGGTCCTCGATGGGTTCGACTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
cgcgctccgg
Secondary structure (Cloverleaf model)
>W2010362684	SeC	TCA
                   c      GCCA cgcgctccgg
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     T A C C C     A
      C C C        A      | | | | |     G
    G       C G G G       A T G G G     C
    G       | + + |                 T T
    T       G T T C
      G G          C     TGGGGGGCCAGACCAGCTGGTCCTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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