The detailed information of tRNA gene sequence


Sequence ID>SRA1034237
Genome IDSRR035089.32438
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 417
End posion on genome 326
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgttcgttgt
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGTGCTTACCCTGAGAAATTGG
GGTCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
taattaagat
Secondary structure (Cloverleaf model)
>SRA1034237	Ser	GCT
                   t      GCCA taattaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TACCCTGAGAAATTGGGGTC
                    G + T
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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