The detailed information of tRNA gene sequence


Sequence ID>W2010363062
Genome IDCADDZB010000055
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium [CADDZB]
Start position on genome 10041
End posion on genome 10134
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gacgggttgc
tRNA gene sequence 
GGGAGAAGGTTGGGGCTGGTGCCCCTGCTGGTCTTCAAAACCAGTTGGTCTTCATCCCGA
AGACTGGTAGGTTCGATTCCTATCTTCTCCCGCCc
Downstream region at tRNA end position 
ggcggacttc
Secondary structure (Cloverleaf model)
>W2010363062	SeC	TCA
                   c      GCCc ggcggacttc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    G     T A T C C     A
      T C G        T      + | | | |     G
    G       G G G T       G T A G G     C
    G       | | |                   T T
    T       C C C T
      G C          G     TTGGTCTTCATCCCGAAGACTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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