The detailed information of tRNA gene sequence


Sequence ID>SRA1034317
Genome IDSRR035089.55159
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 307
End posion on genome 397
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttagcttcA
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTCTATGGTGACGGTCTTGAAAACCGTTGTCGCGCAAGCGACC
GTGGGTTCGAATCCCACCCCTCCGCCGCCA
Downstream region at tRNA end position 
tcctttattt
Secondary structure (Cloverleaf model)
>SRA1034317	Ser	TGA
                   A      GCCA tcctttattt
                     G - C
                     G - C
                     A   G
                     G - C
                     G - C
                     G + T
                     G - C          C C
                    T     C C C A C     T
      T G A        G      | | | |       A
    G       G C C T       G G G T T     A
    G       + | |                   C G
    T       T G G T
      C T A        G     TGTCGCGCAAGCGACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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