The detailed information of tRNA gene sequence


Sequence ID>W2010396186
Genome IDFTLD01000018
Search identical group
Phylum/ClassActinomycetota
SpeciesCollinsella bouchesdurhonensis Marseille-P3296 [FTLD]
Start position on genome 79271
End posion on genome 79181
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcacttaac
tRNA gene sequence 
GGAGAGTTGTCCGAGCGGCCGAAGGAGCACGATTGGAAATCGTGTAGGCGTCAAAAGCGT
CTCCGGGGTTCAAATCCCCGACTCTCCGCCA
Downstream region at tRNA end position 
gatttcactc
Secondary structure (Cloverleaf model)
>W2010396186	Ser	GGA
                   c      GCCA gatttcactc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G C C C C     A
      C G A        G      | | | | |     A
    G       G C C T       C G G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAGGCGTCAAAAGCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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