The detailed information of tRNA gene sequence


Sequence ID>SRA1034650
Genome IDSRR035089.145435
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 180
End posion on genome 90
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgaaatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTACGCCATAAGTGT
ACCGGGGGTTCGAATCCCTTCCTCTCCGCAA
Downstream region at tRNA end position 
aaaataagtt
Secondary structure (Cloverleaf model)
>SRA1034650	Ser	GGA
                   t      GCAA aaaataagtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        G      + + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTACGCCATAAGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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