The detailed information of tRNA gene sequence


Sequence ID>SRA1035102
Genome IDSRR035089.238388
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 531
End posion on genome 444
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnatagtg
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTTAAGGCGGCGGCTTGCTAAGCCGTTGTACGTTTTGGCGTA
CCGTAGGTTCGAATCCTACCGTCTCCGCgt
Downstream region at tRNA end position 
tttgacaaat
Secondary structure (Cloverleaf model)
>SRA1035102	Ser	GCT
                   g      GCgt tttgacaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTACGTTTTGGCGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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