The detailed information of tRNA gene sequence


Sequence ID>W2010454311
Genome IDJAAEJZ010000023
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilineae bacterium clx_CAG1 [JAAEJZ]
Start position on genome 34713
End posion on genome 34614
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acaatagagc
tRNA gene sequence 
gCGGGAGGGGATGTAGCCCGGTGGCTGCCCCAGTCTTCAAAATTGGTGGCAGGCGGCGCA
AAGTCGGCTGTGGTGGGTTCGACTCCCACGCCTTCCCGCCAgt
Downstream region at tRNA end position 
aagcgctgca
Secondary structure (Cloverleaf model)
>W2010454311	SeC	TCA
                   c      CAgt aagcgctgca
                     g - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C          C C
                    G     C G C A C     T
    C C G A        G      |   | |       C
  C         T G T A       G G G T T     A
  G           + +                   C G
  G         C T G C
    T G G          C     TGGCAGGCGGCGCAAAGTCGGCTGTGGT
                    C - G
                    C - G
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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