The detailed information of tRNA gene sequence


Sequence ID>W2010454329
Genome IDJAAEJZ010000258
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilineae bacterium clx_CAG1 [JAAEJZ]
Start position on genome 35748
End posion on genome 35837
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatcatccgt
tRNA gene sequence 
GGAGGGATGGCCGAGTGGACGATGGCGGTTGTCTTGAAAACAACTGTGGCAGTAATGTCA
CCGGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tatagcctag
Secondary structure (Cloverleaf model)
>W2010454329	Ser	TGA
                   t      GCCA tatagcctag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        G     TGTGGCAGTAATGTCACC
                    G - C
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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