The detailed information of tRNA gene sequence


Sequence ID>W2010454332
Genome IDJAAEJZ010000260
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilineae bacterium clx_CAG1 [JAAEJZ]
Start position on genome 48023
End posion on genome 48109
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catatcacag
tRNA gene sequence 
GGAGAGGTCGCATAGTCCGGTTGAGTGCGCGCGTCTCGAAAACGCGTAGGGTAATACCCT
CGGGGGTTCAAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
ccagagcccc
Secondary structure (Cloverleaf model)
>W2010454332	Ser	CGA
                   g      GCtc ccagagcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | + | | |     A
  C         T A C G       G G G G G     C
  G         + | | |                 T T
  G         G T G C
    T T G A        G     TAGGGTAATACCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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