The detailed information of tRNA gene sequence


Sequence ID>W2010454436
Genome IDJAAEKC010000009
Search identical group
Phylum/ClassChloroflexota
SpeciesAnaerolineae bacterium clx_SAG4 [JAAEKC]
Start position on genome 4211
End posion on genome 4120
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaggtaattc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGACGATTGGGGCTGCCTGCTAAGCAGTTGTGGGGGTTAAACTC
CACCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
cacagaaacg
Secondary structure (Cloverleaf model)
>W2010454436	Ser	GCT
                   c      GCCA cacagaaacg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C A G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTGGGGGTTAAACTCCACC
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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