The detailed information of tRNA gene sequence


Sequence ID>W2010458467
Genome IDJAAFGM010000001
Search identical group
Phylum/ClassChloroflexota
SpeciesCandidatus Roseilinea sp. NK_OTU-006 [JAAFGM]
Start position on genome 217215
End posion on genome 217287
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tttcgttcaa
tRNA gene sequence 
GGGCCAGTGGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGTCAGGGGTTCAAGT
CCCCTCTGGTCCAtga
Downstream region at tRNA end position 
caatcctgcg
Secondary structure (Cloverleaf model)
>W2010458467	Ala	GGC
                   a      Atga caatcctgcg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T C C C C     A
      T G A        G      | | | | |     A
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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