The detailed information of tRNA gene sequence


Sequence ID>W2010458468
Genome IDJAAFGM010000001
Search identical group
Phylum/ClassChloroflexota
SpeciesCandidatus Roseilinea sp. NK_OTU-006 [JAAFGM]
Start position on genome 320768
End posion on genome 320842
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgcaaacagc
tRNA gene sequence 
GGCCTCCTAGCTCAGTTGGTCAGAGCGCACGGTTCACATCCGTGAGGTCACAGGTTCGAG
CCCTGTGGAGGCCACtg
Downstream region at tRNA end position 
gagaaaaggc
Secondary structure (Cloverleaf model)
>W2010458468	Val	CAC
                   c      ACtg gagaaaaggc
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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