The detailed information of tRNA gene sequence


Sequence ID>W2010458478
Genome IDJAAFGM010000005
Search identical group
Phylum/ClassChloroflexota
SpeciesCandidatus Roseilinea sp. NK_OTU-006 [JAAFGM]
Start position on genome 6573
End posion on genome 6480
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catcgtccgt
tRNA gene sequence 
GAGGGTGGATGCGCCCCGGTGGGCGTCCTGGTCTTCAAAACCAGTGGCAGGTTGCTCGGC
AAGCTGCGGTGAGTTCGACTCTCATCCGCCCTCGttg
Downstream region at tRNA end position 
atttcagaat
Secondary structure (Cloverleaf model)
>W2010458478	SeC	TCA
                   t      Gttg atttcagaat
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T C
                    A     T A C T C     A
      C C C        T      + | | | |     G
    G       C G C G       G T G A G     C
    G       | | | +                 T T
    T       G C G T
      G G          C     TGGCAGGTTGCTCGGCAAGCTGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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