The detailed information of tRNA gene sequence


Sequence ID>W2010458488
Genome IDJAAFGM010000014
Search identical group
Phylum/ClassChloroflexota
SpeciesCandidatus Roseilinea sp. NK_OTU-006 [JAAFGM]
Start position on genome 48128
End posion on genome 48203
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcagcgaga
tRNA gene sequence 
GGGCGATTAGCTCAGTTGGTTAGAGCATCCCTCTGATAAGGGGAAGGTCTCAAGTTCGAG
TCTTGAATCGCCCACCt
Downstream region at tRNA end position 
tacttcgggt
Secondary structure (Cloverleaf model)
>W2010458488	Ile	GAT
                   a      ACCt tacttcgggt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     A G T T C     A
      T G A        A      | | | | |     G
    T       C T C G       T C A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    C - G
                    C - G
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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