The detailed information of tRNA gene sequence


Sequence ID>SRA1035383
Genome IDSRR035089.294111
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 132
End posion on genome 40
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctaacgcag
tRNA gene sequence 
gGGAGGGTTAATGGGTCCCGGTGGGCCTTCTGGTCTTCAAAACCAGTGTGGGGCTGTGAA
AAGCCCTGGGTGGGTTCAACTCCCACACCTTCCCgcca
Downstream region at tRNA end position 
gcctgttttc
Secondary structure (Cloverleaf model)
>SRA1035383	SeC	TCA
                   g      gcca gcctgttttc
                     g - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A          T C
                    T     C A C C C     A
    C C T G        A      | | | | |     A
  C         G G T A       G T G G G     C
  G           |   |                 T T
  G         G C C T
    T G G          T     TGTGGGGCTGTGAAAAGCCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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