The detailed information of tRNA gene sequence


Sequence ID>SRA1035450
Genome IDSRR035089.307273
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 212
End posion on genome 303
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttttttttgt
tRNA gene sequence 
GGAGAGATGCCGGAGCGGTTGAACGGGACGGTCTCGAAAATCGTTGTCCGTCGTTTGGCG
GACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttgaaattc
Secondary structure (Cloverleaf model)
>SRA1035450	Ser	CGA
                   t      GCCA tttgaaattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTCCGTCGTTTGGCGGACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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