The detailed information of tRNA gene sequence


Sequence ID>SRA1035578
Genome IDSRR035089.334186
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 486
End posion on genome 397
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccggcgccc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTCGATCGGGACGGTCTCGAAAACCGTTGTGCGTGCAAGCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttccatgtt
Secondary structure (Cloverleaf model)
>SRA1035578	Ser	CGA
                   c      GCCA tttccatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGTGCGTGCAAGCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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