The detailed information of tRNA gene sequence


Sequence ID>W2010499461
Genome IDJAALJI010000016
Search identical group
Phylum/ClassPlanctomycetota
SpeciesPaludisphaera sp. JC670 [JAALJI]
Start position on genome 162352
End posion on genome 162254
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgtcgctcgg
tRNA gene sequence 
GGGGGCGTGTCCGAGGCTGGTGCCCGGCCTGGTCTTCAAAACCAGAGAGCGGTCGCGAGA
GCGATCGCTGGTGGGTTCGATTCCCATACGCTCCCGCCA
Downstream region at tRNA end position 
tccctccggt
Secondary structure (Cloverleaf model)
>W2010499461	SeC	TCA
                   g      GCCA tccctccggt
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    G     T A C C C     A
      C G G        T      + | | | |     G
    T       A G C C       G T G G G     C
    G         | | |                 T T
    G       C C G G
      T G C        C     AGAGCGGTCGCGAGAGCGATCGCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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