The detailed information of tRNA gene sequence


Sequence ID>SRA1035630
Genome IDSRR035089.343156
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 350
End posion on genome 257
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caaagatgaa
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGTTCGCTTGGAGAGCGATTGGGCGGCCATAAGC
TGTCTCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttaata
Secondary structure (Cloverleaf model)
>SRA1035630	Ser	GGA
                   a      GCCA gtttttaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G C G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TGGGCGGCCATAAGCTGTCTC
                    T   T
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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