The detailed information of tRNA gene sequence


Sequence ID>SRA1035705
Genome IDSRR035089.357886
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 165
End posion on genome 76
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atacatatcc
tRNA gene sequence 
TGGAGAGGTGGGAGAGTGGCTTAATCCACCAGTTTGCTAAACTGGCGTACCAAATACGGT
ACCGGGGGTTCGAATCCCCCCTCTCCGCAAa
Downstream region at tRNA end position 
ccctcaaacc
Secondary structure (Cloverleaf model)
>SRA1035705	Ser	GCT
                   c      CAAa ccctcaaacc
                     T + G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    G     C C C C C     A
    T G A G        T      | | | | |     G
  G         A G G G       G G G G G     C
  G           + | |                 T T
  C         A T C C
    T T A          A     CGTACCAAATACGGTACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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