The detailed information of tRNA gene sequence


Sequence ID>SRA1035943
Genome IDSRR035089.410364
Search identical group
Phylum/Class454 Sequencing (SRP001810)
Species
Start position on genome 78
End posion on genome 175
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaaatagt
tRNA gene sequence 
GGAGAGGTGCCCGAGCCTGGCTGATGGGGAATGTTTGCTAAACATTTGGGCCTCTGAAAA
GGGGTCCCGAGGGTTCAAATCCCTCCCTCTCCCGGCCA
Downstream region at tRNA end position 
ccttaaaaaa
Secondary structure (Cloverleaf model)
>SRA1035943	Ser	GCT
                   t      GCCA ccttaaaaaa
                     G   G
                     G - C
                     A   C
                     G - C
                     A - T
                     G - C
                     G + T          C C
                    T     C C C T C     T
    C C G A        G      | | |         A
  T         G C C C       G G G T T     A
  G         + | | |                 C A
  G         T G G G
    C T G A        G     TGGGCCTCTGAAAAGGGGTCCCGA
                    A - T
                    A - T
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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