The detailed information of tRNA gene sequence


Sequence ID>W2010570413
Genome IDJAATWC010000001
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDissulfurirhabdus thermomarina SH388 [JAATWC]
Start position on genome 540897
End posion on genome 540994
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gacagttacc
tRNA gene sequence 
GGAAGCGGAAAGGGCGCTGGTGGCCCTCCCGGACTTCAAATCCGGTGCACGGGGTGAGGA
GCCCCGTGGGTGGGTTCGATTCCCATGCGCTTCCGCCA
Downstream region at tRNA end position 
ggtgcaagcc
Secondary structure (Cloverleaf model)
>W2010570413	SeC	TCA
                   c      GCCA ggtgcaagcc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C G C        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     TGCACGGGGTGAGGAGCCCCGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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