The detailed information of tRNA gene sequence


Sequence ID>W2010570422
Genome IDJAATWC010000002
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDissulfurirhabdus thermomarina SH388 [JAATWC]
Start position on genome 55909
End posion on genome 55985
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gggtatcggt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAGAGGTTCAAA
TCCTCTCCCCGCTACCA
Downstream region at tRNA end position 
aattttgcag
Secondary structure (Cloverleaf model)
>W2010570422	fMet	CAT
                   t      ACCA aattttgcag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    C       C G A G       A G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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